BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A10SP1|AL427248
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1541 1398 0.0
>3x_Contig1541
Length = 10565
Score = 1398 bits (689), Expect = 0.0
Identities = 828/895 (92%)
Strand = Plus / Minus
Query: 5 aaccattctgccggtctgttaagtacaacatcaagaaggtcatttggtgtggatagttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5062 aaccattctgccggtctgttaagtacaacatcaagaaggtcatttggtgtggatagttca 5003
Query: 65 gaaacagacgcgataaagtcaaactcgtccgtwgtcggataaagaaccatagctggaaat 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5002 gaaacagacgcgataaagtcaaactcgtccgtagtcggataaagaaccatagctggaaat 4943
Query: 125 wttawttgtgattctwaatctgttgggttttccaatgtgagtttwgtwtctttcawwaga 184
||| ||||||||| |||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 4942 attaattgtgattcgaaatctgttgggttttccaatgtgagtttagtatctttcaaaaga 4883
Query: 185 cctgctggttgtttggtwtcaactagcgttwtgtttcttwtttgttctgccagatccaaa 244
||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 4882 cctgctggttgtttggtatcaactagcgttatgtttcttatttgtactgccagatccaaa 4823
Query: 245 wwctcttggagttccttttccttctgtttttgagctaaagtwcgattctccagctccttt 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4822 aactcttggagttccttttccttctgtttttgagctaaagtacgattctccagctccttt 4763
Query: 305 ttwcgttttagcttttcagtwgctttggwctggwtggttttttwtgccccattttcaggt 364
|| ||||| ||||||||||| ||||||| |||| ||| |||| |||||||||||||||
Sbjct: 4762 ttacgtttaagcttttcagtagctttggactggatggattttaatgccccattttcagga 4703
Query: 365 tccacggcaagcccaacttgaacggcctcgagagattcttcgaaccttcccawttcgaga 424
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 4702 tccacggcaagcccaacttgaacggcctcgagagaatcttcgaaccttcccaattcgaga 4643
Query: 425 taagcctttccttttctgatawwtgccttttcgttttttgctttttgtttgtgtgcctyc 484
|||||||| ||| |||||| | |||||| |||||||||| ||| ||||| |||||| |
Sbjct: 4642 taagccttacctattctgaaaaatgccttaacgttttttgcatttagtttgagtgcctcc 4583
Query: 485 ctacagtttttgatactwcttcttttgttttttwtttcaagctcgctagctgccaawttc 544
||||||| ||||||| ||||| | |||||| |||||||||||| ||| ||||| |||
Sbjct: 4582 ctacagtaattgatacaacttctatagtttttaatttcaagctcgcaagcagccaaattc 4523
Query: 545 waatactaagtttctttgatagatagttcttcacatttttcatccaaagctttcttwtac 604
||||| ||| ||| |||||||||||| | |||||||| |||||||||||||| |||
Sbjct: 4522 aaatacaaagattcattgatagatagtacatcacatttaacatccaaagctttcaaatac 4463
Query: 605 ttagcccttgcttcctttawcctcttacccttgttaagdtcgttcccttgattcttgaaa 664
|||||||||| ||||| | |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 4462 atagcccttgcatccttaaacctcttacccttgtaaagatcgttcccttgattcttgaaa 4403
Query: 665 ttagttgcaatttcatggggctcaccttcataggccatggcttttaaggcttccaactct 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 ttagttgcaatttcatggggctcaccttcataggccatggcttttaaggcttccaactct 4343
Query: 725 acattgctttcatctgggtcaagtttgttcataaaaaatggcatcttatttaactcctcc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4342 acattgctttcatctgggtcaagtttgttcataaaaaatggcatcttatttaactcctcc 4283
Query: 785 aatacctcatcagtggttttattttggaactcagatagttgtggtggtaaaagtgggtca 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 aatacctcatcagtggttttattttggaactcagatagttgtggtggtaaaagtgggtca 4223
Query: 845 tttggacctggaacatacctctttggtttttccattgtgagcrggccttagtaga 899
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4222 tttggacctggaacatacctctttggtttttccattgtgagcaggccttagtaga 4168
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5499
Number of Sequences: 1807
Number of extensions: 5499
Number of successful extensions: 131
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)